How to enable Magnet links in Gnome-ish (Gnome 2, Gnome 3, Unity, Cinnamon, ...) desktop environments for Transmission BitTorrent client:
gconftool-2 -t string -s /desktop/gnome/url-handlers/magnet/command "/usr/bin/transmission %s"
gconftool-2 -t bool -s /desktop/gnome/url-handlers/magnet/needs_terminal false
gconftool-2 -t bool -s /desktop/gnome/url-handlers/magnet/enabled true
Source: http://maketecheasier.com/open-magnet-link-in-browser/2010/02/19
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